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Equipment & Procedures > Equipment and Software List

 

Biological

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Electrical & Data Acquisition top

 

Mechanical top

 

Software & Othertop

 

 

Alphabetical List of Equipment and Software with Descriptions:

 

Autopipettor/Pipette Filler by Thermo Scientifictop
Location: 376
Description:
An automatic pipettor for macroscale liquid handling.


 
Links:
Manual

 

Bake Oven (Isotemp 500) by Fisher Scientific top
Location: Cart near 300
Description:
A bake oven, for the drying of glassware or for the curing steps of chemical reactions. Can also be used as an incubator, though it is not the intended use.

Bake Oven
Links:
See Instructions on Machine.

 

Balances - Mass (MS104S) by Mettler Toledo          top
Location: 111, 161
Description:
A self-calibrating mass balance. Up to 7 significant figures. Capacity: 120g. Minimum: 0.1 mg.


Analytical Balance
Links:
Quick Guide
Manual

 

BIOPAC Data Acquisition Unit (MP35) and sensorsby BioPac top
Location: Stations 1-16; Location 266 in Projects Room
Description:
The physical interface between BIOPAC software and hardware. Four channels and an electrode check are included. All lab PCs have the BIOPAC software installed. A number of sensors are available.

Biopac
Links:
Available sensors in the lab
Biopac Software Guide for use in the Lab, sample.gtl file, sample.acq file
Hardware Manual
Student Manual
Student Tutorial

 

Biosafety Cabinets (SterilGard Advance III) by The Baker Companytop
Location: 357
Description:
Biosafety cabinet, for the sterile or aseptic culture of cells and tissues.

Biosafety Cabinet
Links:
Manual

 

Centrifuge (Centra CL2) by Centratop
Location: 207
Description:
A centrifuge with swinging-bucket rotor for the centrifugation of 15 mL and 50 mL centrifuge tubes. Four tube capacity. Speed Range: 1000-3175 RPM; Max RCF: 1750 x g; Max Capacity: 200 mL (4 x 50 mL)

Centra Centrifuge
Links:
Specifications
Manual

 

Centrifuges - Micro (166-0602) by Bio-Rad           top
Location: 129, 161
Description:
A microcentrifuge, for the centrifugation of 1.5 - 2.0 µL samples. Has an attachment for the centrifugation of PCR tubes, as well. Speed Range: 1000-14000 RPM.

Microcentrifuge
Links:
Manual

 

Centrifuge - Mini (166-0603) by Bio-Rad   top
Location: 207, 367
Description:
A minicentrifuge, for the centrifugation of 1.5 - 2.0 µL samples. Has attachments for the centrifugation of PCR tubes, as well. Fixed speed: 6000 RPM.

Mini-centrifuge
Links:
See notes on machine.

 

CO2 Manifold (BIHL-4-2) by Western Innovator top
Location:  Front Entrance of the Lab
Description:
A gas regulator for the Fisher Scientific 1325526 incubator ; this machine regulates the gas pressure from gas tanks in the main lab to create an atmosphere of specific composition in the incubator.

CO2 Manifold
Links:
Manual
Flow Regulation
Datasheet

 

 

Colony Count Matlab M-File by Naveen Ponnappa, BE ’12          top
Location: N/A
Description:
A MATLAB m-file that assists with colony-counting on individual plates. Can be applied to numerous spot-counting situations. Instructions included in the m-file comments.


colony count program
Links:
Download m-file
YouTube Link

 

Conductivity Meters (Model 1056) by Amber Science      top
Location: 365
Description:
A device that measures the conductance of liquids pumped through it. Output is read in mV.


Conductivity Meter
Links:
Manual

 

DAQ Boards (myDAQ) by National Instruments         top
Location: Stations 1-16; Location 266 in Projects Room
Description:
A Data Acquisition, or DAQ Board. Used for interface between LabView software and hardware/circuitry. +/-10V input and sampling rate of 200kS/s. Digital I/O are 3.3V LVTTL and are tolerant to 5 V inputs. Digital output is not compatible with 5 V CMOS. Contains a +/-15V & +5V power source. In conjunction with the NI ELVISmx Software, the device can be used as a Digital Multimeter, Function Generator, Bode Analyzer, Oscilloscope, etc. On BE lab PCs, the ELVISmx software can be accessed through Start >> All Programs >> BE ugrad lab software >> NI ELVISmx for myDAQ >> NI ELVISmx Instrument Launcher.

DAQ Board
Links:
NI myDAQ Support Information with User Guides
Using the myDAQ as measurement and signal generation tools
Using the myDAQ to control an LED
Device Manual
Introduction to LabVIEW site
LabVIEW Tutorial

 

 

DAQ Boards (USB-6008) by National Instruments         top
Location: Available upon request
Description:
A Data Acquisition, or DAQ Board. Used for interface between LabView software and hardware/circuitry.

DAQ Board
Links:
Datasheet
Quick Start Guide
Manual
Introduction to LabVIEW site
LabVIEW Tutorial
Guide to the "Virtual Voltmeter" used in the lab

 

 

Drill (DeWalt DC930) by DeWalt    top
Location: 269
Description:
A power drill, battery powered.

Dewalt Drill
Links:
Manual

 

Drill (Ryobi D41) by Ryobi   top
Location: 269
Description:
A power drill, corded.

Ryobi Drill
Links:
Manual

 

 

Fume Hoods (SafeAire) by Fisher Hamilton       top
Location: 123, 223, 227 [Fume hoods at 223 & 227 are NOT available for student use]
Description:
Fume hood, for the handling of liquids or solids that produce noxious fumes or other phenomena hazardous to human health.

Fume Hood
Links:
Manual

 

Function/Signal Generator (AWG-4105) by Aktakom       top
Location: 272
Description:
An AC voltage generator, for applications in circuit design and analysis.


Function Generator
Links:
Manual

 

Electrophoresis Equipment - Horizontal by Bio-Radtop
Location: 205 & 217
Description:
Electrophoresis equipment for DNA, including PowerPac power supplies, Mini-Sub GT Gel-boxes and casting supplies with 8 and 15 well combs.

Horizontal Electrophoresis

Links:
PowerPac Power Supply Manual
Mini-Sub GT Gel Box and Casting Manual with Sample Protocols

 

Electrophoresis Equipment - Vertical by Bio-Radtop
Location: 216 & 217
Description:
Electrophoresis equipment for protein, including PowerPac power supplies, Mini-Protean 2/3 Gel-boxes and casting supplies.

Vertical Electrophoresis

Links:
PowerPac Power Supply Manual
Mini-Protean 3 Manual with Sample Protocols

 

Hot Plates w/ Stirrers by Corning    top
Location: 131
Description:
Hot plates equipped with a single magnetic stirrer; can be used to heat liquids and solids, or to make solutions. Model PC-620 with analog controls, Model PC-420D with digital controls.


Hot Plate
Links:
Manual (Model PC-620)
Manual (Model PC_420D)

 


Ice Machine (QD-0132A) by Manitowoc   top
Location: Near 129
Description:
An ice machine for the constant generation of laboratory ice.


Ice Machine
Links:
Manual

 

Incubator - CO2 (Isotemp) by Fisher Scientifictop
Location:  363
Description:
An incubator intended for cell and tissue culture. Atmosphere composition and temperature can be controlled.


CO2 Incubator
Links:
Manual

 

Incubators - Mini (166-0501) by Bio-Rad top
Location: 127
Description:
A compact 120V incubator for growing bacteria. Includes adjustable shelf, alcohol thermometer, and over-temperature protection. Capacity: eighty 6.5cm culture plates. (Temperature Range: Room Temp to 60°C).


Mini-incubator

Links:
See notes on machine.

 

Instron Pneumatic Pump by GDW Vacuum Technology, Inc.        top
Location: 173, 185
Description:
A vacuum pump, used to provide pneumatic pressure for the Instron grips used in tensile testing. 30-45 psi is the safe range of activity for this pump.

Instron Pump
Links:
Manual

 

Instron Test Frame (Model 4444) by Instron          top
Location: 185
Description:
Instron mechanical tester. Different attachments provide for tensile testing and 3-point bending. Connected to computer equipped with Bluehill interface software. Older model. Two systems are available, one with a 2KN load cell and the other with a 500N load cell.

Instron 4444
Links:
Using the Instron Test System in the Lab
Instron 4444 Reference Manual
Bluehill Software Manual

 

Instron Test Frame (Model 5544) by Instron          top
Location: 173
Description:
Instron mechanical tester. Different attachments provide for tensile testing and 3-point bending. Connected to computer equipped with Bluehill interface software. Newer model. Uses a 2KN load cell.

Instron 5544
Links:
Using the Instron Test System in the Lab
Instron 5544 Reference Manual
Bluehill Software Manual

  

 

LabView by National Instruments    top
Location: All Lab PCs
Description:
Software package for rapid prototyping of data acquisition tools.

Links:
ntroduction to LabVIEW site
LabVIEW Tutorial

 

 

Laser Cutter (VLS 3.50) by Universal Laser Systems   top
Location: Back Entrance (North side of lab)
Description:
Laser cutter for cutting sheets of materials. This device has a 50 W laser and bed size of 12" x 24". Users may only use materials provided by the lab (1/4" MDF and 1/8" & 1/4" acrylic). Access to the laser cutter is restricted to trained users (see training guide in Links below) and projects for Bioengineering classes which require laser cutting. Instructors should contact the Lab Staff to arrange use for their students.


Links:
Specifications
Laser Cutter Manual
Air Filter Manual
Laser Cut Thickness Guide

Converting Solidworks to DWG for Laser cutting
Using the Laser cutter in the lab
Training procedure
Press fitting tutorial

 

LoggerPro by Vernier    top
Location: All Lab PCs
Description:
Software package for data analysis using Vernier tools. Bioengineering students can download the software by contacting the lab staff.

Links:
LoggerPro Software Manual
LoggerPro Website with tutorial videos

 

 

Microscope - Light (Diaphot 300) by Nikon   top
Location: 304
Description:
A light microscope. Can be used for the visualization of cells and other objects in the microscale visible spectrum. Imaging can be done with attached digital SLR camera.

Nikon Scope
Links:
Microscope Manual
Microscope SLR Imaging Supplement
Nikon D90 Manual (Camera used for Imaging)

 

Microscope - Light (IMT-2) by Olympus       top
Location: 304
Description:
A light microscope. Can be used for the visualization of cells and other objects in the microscale visible spectrum.


Olympus Scope
Links:
Manual
Microscope SLR Imaging Supplement
Nikon D90 Manual (Camera used for Imaging)

 

Microwave by Panasonic      top
Location: 111
Description:
A microwave, for the quick heating of liquids and gels, and for defrosting of samples of frozen substances. Not for food use.

Microwave
Links:
Manual

 

Matlab by MathWorks       top
Location: All Lab PCs
Description:
Software & Programming tool for Engineering, Math & Science.

Links:
Free Download for SEAS Students

 

 

Multimeter (M-3800) by Metex       top
Location:273; Additional available upon request
Description:
Multimeter can measure voltage, current, resistance, etc.

multimeter
Links:
Manual

 

Oscilloscope (ADS-2022) by Aktakom     top
Location: 272
Description:
A device that can be used to observe electrical signals.

Oscilloscope
Links:
Manual

 

top

Oscilloscope / Signal Generator - Virtual (Stingray DS1M12) by USB Instruments
Location:  Available upon request
Description:
This device, along with the EasyScope software can operate as a signal generator and oscilloscope.

EasyScope
Links:
Using the Device in the Lab
Getting Started
EasyScope

 

PCR Thermocycler (MyCycler) by Bio-Rad   top
Location: 252,256
Description:
A PCR machine, used to carry out polymerase chain reaction. Can be programmed to accommodate different PCR protocols.

myCycler
Links:
Quick Guide
Manual
Specifications

 

Peristaltic Pumps (Minipuls 3, Dynamax) by Gilson, Rainin          top
Location: 282
Description:
A peristaltic pump for liquid handling. The pump head can hold four tubes. Head speed is 0.01 to 48 rpm with flow rates of 0.3 uL/min to 40 mL/min.

Pump
Links:
Minipuls 3 Manual
Dynamax Manual

 

 

Peristaltic Pumps (Minipump) by Fisher Scientific           top
Location:282
Description:
A small bidirectional, self-priming peristaltic pump. Medium Flow Model (Operable Range: 0.4 to 85.0 mL/min).


Pump

Links:
Minipump Manual & Specs

 

 

pH Meter (AB15, AR15/17) by Accumettop
Location: 364
Description:
A device used to measure the pH of aqueous solutions.


pH Meter
Links:
Using the Accumet AR15 pH Meter in the Lab
pH Meter Manual
Electrode Manual

 

Power Supply - Variable DC (9902PS) by MPJA top
Location: 273 and additional available on request.
Description:
A DC power supply, for applications in circuit design and analysis. 120VAC input. Output: 3V, 4.5V, 6V, 7.5V, 9V, 12VDC @ 2000mA.

MPJA supply

 

Power Supply - Variable DC (APS-7203) by Aktakom top
Location:  272
Description:
A variable DC power supply, for applications in circuit design and analysis.


DC Power Supply
Links:
Manual

 

 

Projector (NP2250) and Speaker Systems by NEC, JBLtop
Location: Wall Panel of Station 12
Description:
A projector, linked to Station 12 in the main lab. Connections available for composite A/V or a separate laptop. The projector is connected to a speaker system.

Projector
Links:
Using the Projector (available at controls)
Manual

 

Refrigerator/Freezer (Isotemp) by Fisher Scientific top
Location: 300
Description:
A refrigerator designed for the storage of biological samples and reagents. Refrigerator operates at 4oC, while Freezer operates at -20oC.


Fridge
Links:
Information

 

Replicator 3D printer (5th Generation) by Makerbot
Location: 359
Description:
Makerbot 3D printer. Build volume: 11.2" x 6.0" x 6.1". Layer Resolution: High Accuracy: 100µm (0.0039 in); Medium: 270 µm (0.0106in); Low Accuracy: 340 µm (0.0133 in). Material available: PLA (variable colors). All printing will be done by Lab Staff and is restricted to projects for Bioengineering classes which require 3D printing. Instructors should contact the Lab Staff to arrange use for their students.


Links:
Printing instructions in the Lab
Calendar of availability
Makerbot Replicator Manual
PLA Datasheet

 

 

Scales (CS2002) by Ohaus top
Location:  111, 161
Description:
A portable mass balance. Up to 3 significant figures. Capacity: 2000g. Minimum: 1g.

Ohaus Scale
Links:
Using the Scale

 

Serial Cloner top
Location:  All Lab PCs
Description:
Free software tool for simuling molecular biology.

Links:
Software site

 

 

Shaker Incubators (MaxQ 4450) by Thermo Scientifictop
Location:  161
Description:
These incubators can be used for the culture of bacteria in liquid or solid media, during which agitation is required. Speed (Range: 15-500 RPM) and Temperature (Range: Room Temp.+ 5°C - 80°C) are user-controlled.

Shaker
Links:
Manual

 

Soldering Equipment (INT9378) by Aoyue top
Location:  271
Description:
A soldering iron; used to create permanent contacts between disparate electrical components. Solder and other soldering tools available at location 265.

Aoyue Soldering Iron
Links:
Instruction Manual

 

Soldering Equipment by Wellertop
Location:  266
Description:
A soldering iron; used to create permanent contacts between disparate electrical components. Solder and other soldering tools available at location 265.

Soldering Iron
Links:
Techsheet

 

Spectrophotometers (SmartSpec Plus) by Bio-Radtop
Location:  374
Description:
A versatile single-well spectrophotometer that can be used to take OD600 readings, Absorbance, UV, and many more. Absorbance λ Range: 200-800 nm.


SmartSpec
Links:
Using the SmartSpec Plus
Manual
Specifications

Spectrophotometers (SpectroVis Plus) by Vernier top
Location:  375
Description:
A spectrophotometer, for the measurement of properties of emission wavelengths from various samples. Absorbance λ Range: 380-950 nm. Can also measure fluroescence at 405nm or 500nm. LoggerPro Software required.
spectrovis


Links:
Using the SpectroVis and Software in the Lab
LoggerPro Software Manual
SpectroVis Manual
Manufacturer's Information and Videos

 

 

Syringe Pumps (KDS 210) by KD Scientifictop
Location:  378
Description:
Pumps for the handling of automatic dispensation from syringes of various sizes.


Syringe Pump
Links:
Using the Syringe Pump
Manual

 

Transilluminator - UV by Bio-Rad top
Location:  264
Description:
A device that projects UV light through an object. Used primarily for the imaging of gels. UV shield included; All users must wear face masks!

Biorad Transilluminator
Links:
Using the Transilluminator in Lab
Manual

 

Transilluminator Imaging Kit - UV, by FOTODYNE Inc. top
Location: 264
Description:
A digital camera hood packaged with a UV Transilluminator System.


Fotodyne Transilluminator
Links:
Using the UV Transilluminator Imaging System (FotoDyne)

 

Vortexers (BR2000) by Bio-Rad top
Location:  128
Description:
A vortex, designed for the mixing of liquids in 1.5 µL to 50 mL tubes.

Vortexer
Links:
See notes on machine.

 

Water Bath (Isotemp 205) by Fisher Scientific top
Location:  131
Description:
A water bath, used for the thawing of frozen substances, or for the regulation of temperature. The temperature range is from ambient to 60C with the cover open and ambient to 100C with the cover closed.

Water Bath
Links:
Manual

 

 

 

 

 

 

 

 

 
PENN BioengineeringPENN EngineeringPENN
 

Bioengineering Undergraduate Laboratories
Department of Bioengineering
School of Engineering and Applied Science
University of Pennsylvania
240 Skirkanich Hall
210 S. 33rd Street
Philadelphia, PA 19104

Last Update:August 4, 2014
Page Maintained by Sevile G. Mannickarottu